Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885618.1_cds_XP_016439684.1_35214
CDS Infomation

[gene=LOC107765533] [db_xref=GeneID:107765533] [protein=beta-glucosidase BoGH3B-like isoform X2] [protein_id=XP_016439684.1] [location=complement(join(52659..53143,53793..53997,54147..54329,54489..54593,54682..54925,58606..58810,59466..59691))] [gbkey=CDS]
Sequence

ATGGGGAAATTTGCAATAACAACAATTATGATGGGTTTTCTGCTGTTGTTCTTGTGTGCT
GGTGTTACTGAAGCAGTGTACATGAAGTACAAAGACCCAAAACAGCCATTGAATGTTAGA
ATAAGGGATTTGATGAACAGAATGAGTCTTGAAGAAAAAATTGGTCAGATGACCCAGATT
GAGAGACATTTAGCTGCACCTAATATTATGAAGAAATACTTCATTGGGAGTGTACTGAGT
CTTGGAGGAAGTGAACCAGCTCCAAAGGCTACTGCTGCGGACTGGGTAAAGATGGTTAAT
GAAATTCAGAAGGGTTCCCTTTCAACACGCCTCGGTATTCCCATGATCTATGGAATTGAT
GCAGTCCATGGGCACAACAATGTCTATAAAGCCACAATTTTTCCACACAATGTTGGCCTT
GGAGTCATAAGGACTAAAGTAGCAGCCTGTGCTAAGCACTTTGTGGGCGATGGTGGCACT
GTCAAGGGCATTGATGAAAATAACACTGTCATCAGTGCAAATGAGCTACTTAGCATCCAC
ATGCCAGCCTATGTTGATTCCATTATAAAGGGTGTGTCAACAGTAATGATATCTTACTCA
AGCTGGAATGGTATGAAGATGCATGCTAATCGTGATCTGATCACTGGTTTTCTCAAGGGA
AAGCTCAAGTTCAGAGGTTTTGTCATTTCAGATTGGAACGGTATTGACAAGATTACTGAT
CCACCCCATGCGAATTACTCTTACTCTATTCAGGCTGGAGTTCTCGCTGGAATTGACATG
ATTATGGGTCCAGAGAACGTGACTGAATTTCTTGATGATCTGGCTTTCCAAGTCAGGAAC
AATATCATTCCCATGAGCAGGATAGACGATGCAGTTAAGAGGATATTAAGGGTTAAATTT
GTCATGGGTCTCTTTGAGAACCCATTGGCTGATCTCAGCTTAGCGAACCAATTAGGAAGC
CAGGAACACAGAGAATTAGCAAGAGAAGCAGTGAGGAAATCACTTGTACTATTGAAGAAT
GGGAAAGTTATTAGCCAACCACTAATTCCCCTTCCAAAAAAAGTGGCGAAGATACTTGTG
GCTGGTAGTCATGCTGACAATTTGGGTTACCAGTGCGGAGGCTGGACTAGGAGTTGGCAG
GGAATTGGAGGCAACGATCTTACCACAGGAACTACAATTTTAACTGCTGTGAAAAACACA
GTCCATCCATCTACACAAGTGGTCTACCGGGACAATCCAGATGTAAACTTTGTAACGTCC
AACCACTTCTCCTATGCCATTGTTGTCGTAGGTGAAACACCCTACGCAGAGACGTTTGGC
GATGGTGCAAATCTTACAATACCTGAACCTGGTCTCAGTACCATCACTAATGTCTGCAGA
GTCGTGAAATGTGTCGTAGTTGTCATCTCCGGGCGTCCAGTCGTGGTTGAGCCTTATCTT
GCAAATATAGACGCCCTCGTGGCTGCATGGCTTCCGGGAAGTGAAGGACAAGGTGTTGCT
GATATTCTGTTTGGTGACTATGGATTCACAGGCAAACTTGCCCGCACTTGGTTCAAGTCG
GTTGACCAGCTTCCCATGAATGTTGGTGATCCACATTACGATCCTTTGTTTCCTTTCGGA
TTTGGTCTCACAACTGAGCCTGTCAAGAGCTAA

Peptide Sequence

PEP ID

XP_016439684.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like isoform X2 [Nicotiana tabacum]
Sequence

MGKFAITTIMMGFLLLFLCAGVTEAVYMKYKDPKQPLNVRIRDLMNRMSLEEKIGQMTQI
ERHLAAPNIMKKYFIGSVLSLGGSEPAPKATAADWVKMVNEIQKGSLSTRLGIPMIYGID
AVHGHNNVYKATIFPHNVGLGVIRTKVAACAKHFVGDGGTVKGIDENNTVISANELLSIH
MPAYVDSIIKGVSTVMISYSSWNGMKMHANRDLITGFLKGKLKFRGFVISDWNGIDKITD
PPHANYSYSIQAGVLAGIDMIMGPENVTEFLDDLAFQVRNNIIPMSRIDDAVKRILRVKF
VMGLFENPLADLSLANQLGSQEHRELAREAVRKSLVLLKNGKVISQPLIPLPKKVAKILV
AGSHADNLGYQCGGWTRSWQGIGGNDLTTGTTILTAVKNTVHPSTQVVYRDNPDVNFVTS
NHFSYAIVVVGETPYAETFGDGANLTIPEPGLSTITNVCRVVKCVVVVISGRPVVVEPYL
ANIDALVAAWLPGSEGQGVADILFGDYGFTGKLARTWFKSVDQLPMNVGDPHYDPLFPFG
FGLTTEPVKS

Transcript Sequence

Gene sequence data has not been registered.